Protein–RNA interactions for Protein: Q9Y3A0

COQ4, Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COQ4Q9Y3A0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 TUBB3P1-201ENST00000405796 1332 ntBASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COQ4Q9Y3A0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 AL162727.3-201ENST00000635661 2787 ntBASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 CETN4P-206ENST00000642099 2168 ntBASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 AC105250.1-201ENST00000509378 2057 ntBASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COQ4Q9Y3A0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 RPL37AP1-201ENST00000412502 279 ntBASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 AC004449.1-201ENST00000564240 433 ntBASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 AL589739.1-201ENST00000607720 493 ntBASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 CICP13-201ENST00000422015 2789 ntBASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COQ4Q9Y3A0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
COQ4Q9Y3A0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
COQ4Q9Y3A0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
COQ4Q9Y3A0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COQ4Q9Y3A0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
COQ4Q9Y3A0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COQ4Q9Y3A0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COQ4Q9Y3A0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms