Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D4Q9Y2X8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 AC073621.1-201ENST00000392730 636 ntBASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 AC136632.2-201ENST00000512891 861 ntBASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 AC021087.4-201ENST00000563761 564 ntBASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D4Q9Y2X8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 AC105250.1-201ENST00000509378 2057 ntBASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
UBE2D4Q9Y2X8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms