Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 MED15P5-201ENST00000423150 992 ntBASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 AC068137.2-201ENST00000605408 478 ntBASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 AL078644.1-201ENST00000609881 752 ntBASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 PRAL-201ENST00000624952 3286 ntBASIC14.46□□□□□ -0.09
POLR1DQ9Y2S0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
POLR1DQ9Y2S0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
POLR1DQ9Y2S0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
POLR1DQ9Y2S0 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
POLR1DQ9Y2S0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
POLR1DQ9Y2S0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
POLR1DQ9Y2S0 AL139384.1-201ENST00000612143 3047 ntBASIC14.46□□□□□ -0.1
POLR1DQ9Y2S0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.1
POLR1DQ9Y2S0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
POLR1DQ9Y2S0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
POLR1DQ9Y2S0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
POLR1DQ9Y2S0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 CICP6-201ENST00000457191 2729 ntBASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 MIR648-201ENST00000385046 94 ntBASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 AC140658.5-201ENST00000438532 169 ntBASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 AL592424.1-201ENST00000563624 1536 ntBASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.45□□□□□ -0.1
POLR1DQ9Y2S0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 AC007950.2-201ENST00000615045 2347 ntBASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
POLR1DQ9Y2S0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms