Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 FOXO1B-201ENST00000504678 1527 ntBASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPH3AQ9Y2J0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 TSPY26P-202ENST00000565928 3884 ntBASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 POU5F1P6-201ENST00000466990 990 ntBASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 RNA5SP410-201ENST00000516285 106 ntBASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 MIR6080-201ENST00000617359 66 ntBASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 Z92544.3-201ENST00000624747 417 ntBASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPH3AQ9Y2J0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.83□□□□□ -0.03
RPH3AQ9Y2J0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.83□□□□□ -0.03
RPH3AQ9Y2J0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPH3AQ9Y2J0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RPH3AQ9Y2J0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
RPH3AQ9Y2J0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPH3AQ9Y2J0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.83□□□□□ -0.03
RPH3AQ9Y2J0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.83□□□□□ -0.03
RPH3AQ9Y2J0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 AP3S2-216ENST00000617003 1561 ntBASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 SPDYE14P-201ENST00000442619 822 ntBASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 AC098859.1-201ENST00000502915 1238 ntBASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 AC084121.4-201ENST00000641598 221 ntBASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 AF228730.8-201ENST00000642140 221 ntBASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.83□□□□□ -0.04
RPH3AQ9Y2J0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms