Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 TNRC18P3-201ENST00000441896 2691 ntBASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 HLA-V-204ENST00000476601 1289 ntBASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 AC098859.1-201ENST00000502915 1238 ntBASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 AC012645.4-201ENST00000610691 1061 ntBASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 AC009118.2-201ENST00000613275 655 ntBASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 AC022144.1-201ENST00000602255 1580 ntBASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 MIR600HG-201ENST00000449175 5984 ntBASIC14.88□□□□□ -0.03
NPIPA1Q9UND3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 AL035456.1-201ENST00000456064 1369 ntBASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 PCGF3-213ENST00000620529 1899 ntBASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 FAM220BP-201ENST00000377689 816 ntBASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 MRPS18AP1-201ENST00000414458 589 ntBASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 TSSK5P-201ENST00000423978 907 ntBASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 AC244107.1-201ENST00000442033 332 ntBASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 AC005225.4-201ENST00000557330 545 ntBASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 AL589739.1-201ENST00000607720 493 ntBASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 AC004233.3-201ENST00000607794 1269 ntBASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 PCDH8P1-201ENST00000428983 2773 ntBASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA1Q9UND3 AC063926.2-201ENST00000623766 1308 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms