Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 AC107918.2-201ENST00000530817 355 ntBASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 PCDHA3-202ENST00000532566 4594 ntBASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB4Q9UN71 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB4Q9UN71 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB4Q9UN71 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB4Q9UN71 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB4Q9UN71 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.71■□□□□ 0.1
PCDHGB4Q9UN71 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 AL365209.1-201ENST00000624418 6473 ntBASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 AL359258.3-201ENST00000622910 2331 ntBASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 AC073621.1-201ENST00000392730 636 ntBASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 AF186996.4-201ENST00000467186 377 ntBASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 AC105339.3-201ENST00000560043 636 ntBASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 AC008735.5-201ENST00000623544 497 ntBASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB4Q9UN71 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 MRPL20P1-201ENST00000400819 433 ntBASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 IGHV3-65-201ENST00000523210 341 ntBASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.69■□□□□ 0.1
PCDHGB4Q9UN71 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms