Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALCOCO1Q9P1Z2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CALCOCO1Q9P1Z2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALCOCO1Q9P1Z2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALCOCO1Q9P1Z2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALCOCO1Q9P1Z2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.7■□□□□ 0.42
CALCOCO1Q9P1Z2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CALCOCO1Q9P1Z2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.7■□□□□ 0.42
CALCOCO1Q9P1Z2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CALCOCO1Q9P1Z2 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALCOCO1Q9P1Z2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 AL645728.1-201ENST00000366221 2101 ntBASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 AL122018.1-201ENST00000446607 2310 ntBASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 PMS2P2-201ENST00000425039 1128 ntBASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 MTDHP5-201ENST00000598980 586 ntBASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 GGTLC5P-201ENST00000617623 998 ntBASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALCOCO1Q9P1Z2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 MRPL20P1-201ENST00000400819 433 ntBASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 KRT18P2-201ENST00000447938 1258 ntBASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 AC139749.1-202ENST00000617529 3139 ntBASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.68■□□□□ 0.42
CALCOCO1Q9P1Z2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CALCOCO1Q9P1Z2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms