Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC079781.3-201ENST00000449110 356 ntBASIC15.25■□□□□ 0.03
VAPAQ9P0L0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 AC002347.1-201ENST00000569543 541 ntBASIC15.25■□□□□ 0.03
VAPAQ9P0L0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 MIR7706-201ENST00000613747 67 ntBASIC15.25■□□□□ 0.03
VAPAQ9P0L0 AC010507.1-201ENST00000633895 436 ntBASIC15.25■□□□□ 0.03
VAPAQ9P0L0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VAPAQ9P0L0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 AC009090.5-201ENST00000624886 2285 ntBASIC15.24■□□□□ 0.03
VAPAQ9P0L0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 CRYGEP-201ENST00000412192 528 ntBASIC15.24■□□□□ 0.03
VAPAQ9P0L0 GPX1P2-201ENST00000429271 606 ntBASIC15.24■□□□□ 0.03
VAPAQ9P0L0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 RHOQP3-201ENST00000437982 621 ntBASIC15.24■□□□□ 0.03
VAPAQ9P0L0 AC009947.1-201ENST00000444350 727 ntBASIC15.24■□□□□ 0.03
VAPAQ9P0L0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 AC096734.2-201ENST00000562054 433 ntBASIC15.24■□□□□ 0.03
VAPAQ9P0L0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.24■□□□□ 0.03
VAPAQ9P0L0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.24■□□□□ 0.03
VAPAQ9P0L0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VAPAQ9P0L0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 UNC93B6-202ENST00000528242 690 ntBASIC15.23■□□□□ 0.03
VAPAQ9P0L0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
VAPAQ9P0L0 AC112693.3-201ENST00000624819 1983 ntBASIC15.23■□□□□ 0.03
VAPAQ9P0L0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms