Protein–RNA interactions for Protein: Q9P032

NDUFAF4, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF4Q9P032 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFAF4Q9P032 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFAF4Q9P032 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.94□□□□□ -0.02
NDUFAF4Q9P032 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFAF4Q9P032 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NDUFAF4Q9P032 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFAF4Q9P032 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.94□□□□□ -0.02
NDUFAF4Q9P032 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NDUFAF4Q9P032 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 AC109635.5-201ENST00000533593 962 ntBASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 AC117500.6-201ENST00000624871 588 ntBASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 AC092127.1-201ENST00000567093 3455 ntBASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NDUFAF4Q9P032 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 AL589702.1-201ENST00000641229 1509 ntBASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 FAM197Y8-203ENST00000450145 560 ntBASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 KRT18P34-201ENST00000488218 1270 ntBASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 MIR4321-201ENST00000592276 80 ntBASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 AP001282.1-201ENST00000531301 1499 ntBASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.92□□□□□ -0.02
NDUFAF4Q9P032 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFAF4Q9P032 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.91□□□□□ -0.02
NDUFAF4Q9P032 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFAF4Q9P032 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFAF4Q9P032 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFAF4Q9P032 AC134407.2-201ENST00000625089 1978 ntBASIC14.91□□□□□ -0.02
NDUFAF4Q9P032 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.91□□□□□ -0.02
NDUFAF4Q9P032 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.91□□□□□ -0.02
NDUFAF4Q9P032 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NDUFAF4Q9P032 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms