Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 AC120498.10-201ENST00000621827 505 ntBASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 CICP1-201ENST00000416803 2410 ntBASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 LINC00894-206ENST00000450989 2361 ntTSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 AC015819.3-201ENST00000624305 2674 ntBASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CDC42SE1Q9NRR8 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 AC112693.3-201ENST00000624819 1983 ntBASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 TSPY23P-201ENST00000440136 739 ntBASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CDC42SE1Q9NRR8 AL512791.2-201ENST00000615251 4609 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms