Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 AC026691.1-201ENST00000602502 2017 ntBASIC15.07■□□□□ 0
CDCP1Q9H5V8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 AC241585.1-201ENST00000433527 519 ntBASIC15.07■□□□□ 0
CDCP1Q9H5V8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 AC105021.1-202ENST00000570572 669 ntBASIC15.07■□□□□ 0
CDCP1Q9H5V8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDCP1Q9H5V8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CDCP1Q9H5V8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 AL589739.1-201ENST00000607720 493 ntBASIC15.06■□□□□ 0
CDCP1Q9H5V8 AL138828.2-201ENST00000615812 383 ntBASIC15.06■□□□□ 0
CDCP1Q9H5V8 SPDYE12P-201ENST00000618416 771 ntBASIC15.06■□□□□ 0
CDCP1Q9H5V8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDCP1Q9H5V8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDCP1Q9H5V8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.05■□□□□ 0
CDCP1Q9H5V8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CDCP1Q9H5V8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CDCP1Q9H5V8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.05■□□□□ 0
CDCP1Q9H5V8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ 0
CDCP1Q9H5V8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CDCP1Q9H5V8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
CDCP1Q9H5V8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms