Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF41Q9H4P4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 AC024909.3-201ENST00000611513 2257 ntBASIC18.93■□□□□ 0.62
RNF41Q9H4P4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 TSSK5P-201ENST00000423978 907 ntBASIC18.93■□□□□ 0.62
RNF41Q9H4P4 HIST3H2BA-201ENST00000436555 524 ntBASIC18.93■□□□□ 0.62
RNF41Q9H4P4 AL512638.1-201ENST00000457493 794 ntBASIC18.93■□□□□ 0.62
RNF41Q9H4P4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RNF41Q9H4P4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF41Q9H4P4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF41Q9H4P4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms