Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 AC124947.2-201ENST00000547118 1133 ntBASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 U62317.3-201ENST00000608319 855 ntBASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2OQ9C0C9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 AL442647.2-201ENST00000429864 857 ntBASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 AL355864.2-201ENST00000447420 863 ntBASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2OQ9C0C9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 HINT2P1-201ENST00000419438 481 ntBASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 AC068587.3-201ENST00000526613 355 ntBASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UBE2OQ9C0C9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms