Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 AL353593.2-201ENST00000602529 1483 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 PCGF3-213ENST00000620529 1899 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 HMGA1P5-201ENST00000412453 271 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 KLF4P1-201ENST00000412782 1185 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 AC012618.2-201ENST00000428058 849 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 RBM17P1-201ENST00000453646 1190 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 RASA4DP-201ENST00000460726 1199 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 KRT18P6-201ENST00000555540 1265 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 AC140113.3-201ENST00000605663 199 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 AL359736.2-201ENST00000621992 437 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 AC113410.3-201ENST00000623366 203 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 AC092723.2-201ENST00000624955 793 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 AL049637.2-201ENST00000641778 930 ntBASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms