Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 IGHV3-22-201ENST00000520721 359 ntBASIC14.76□□□□□ -0.05
SNX18Q96RF0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 ACTL9-202ENST00000612068 1252 ntBASIC14.76□□□□□ -0.05
SNX18Q96RF0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 AP002414.3-201ENST00000589352 1468 ntBASIC14.76□□□□□ -0.05
SNX18Q96RF0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.76□□□□□ -0.05
SNX18Q96RF0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SNX18Q96RF0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 BX842568.4-201ENST00000421222 227 ntBASIC14.75□□□□□ -0.05
SNX18Q96RF0 MED15P5-201ENST00000423150 992 ntBASIC14.75□□□□□ -0.05
SNX18Q96RF0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 AC139530.3-201ENST00000620344 690 ntBASIC14.75□□□□□ -0.05
SNX18Q96RF0 AL645728.2-201ENST00000641974 660 ntBASIC14.75□□□□□ -0.05
SNX18Q96RF0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 AC007292.2-201ENST00000593524 1812 ntBASIC14.75□□□□□ -0.05
SNX18Q96RF0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SNX18Q96RF0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.75□□□□□ -0.05
SNX18Q96RF0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SNX18Q96RF0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 RNU1-129P-201ENST00000384064 167 ntBASIC14.74□□□□□ -0.05
SNX18Q96RF0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 MIR1233-2-201ENST00000408138 82 ntBASIC14.74□□□□□ -0.05
SNX18Q96RF0 MIR1233-1-201ENST00000408722 82 ntBASIC14.74□□□□□ -0.05
SNX18Q96RF0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.74□□□□□ -0.05
SNX18Q96RF0 CXCL1P1-201ENST00000502804 216 ntBASIC14.74□□□□□ -0.05
SNX18Q96RF0 RNA5SP415-201ENST00000517246 115 ntBASIC14.74□□□□□ -0.05
SNX18Q96RF0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 AC145285.3-201ENST00000564603 959 ntBASIC14.74□□□□□ -0.05
SNX18Q96RF0 U1.21-201ENST00000580816 167 ntBASIC14.74□□□□□ -0.05
SNX18Q96RF0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SNX18Q96RF0 Z83851.2-201ENST00000609564 659 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms