Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.17■□□□□ 0.66
DDX11Q96FC9 SPDYE14P-201ENST00000442619 822 ntBASIC19.17■□□□□ 0.66
DDX11Q96FC9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 AC140878.1-201ENST00000565277 250 ntBASIC19.17■□□□□ 0.66
DDX11Q96FC9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DDX11Q96FC9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
DDX11Q96FC9 AP003680.1-201ENST00000598970 3660 ntBASIC19.16■□□□□ 0.66
DDX11Q96FC9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 IGHV3-42-201ENST00000520410 361 ntBASIC19.16■□□□□ 0.66
DDX11Q96FC9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 ALG1L8P-201ENST00000533887 760 ntBASIC19.16■□□□□ 0.66
DDX11Q96FC9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 AP000842.3-202ENST00000569238 1080 ntBASIC19.16■□□□□ 0.66
DDX11Q96FC9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 MIR6080-201ENST00000617359 66 ntBASIC19.16■□□□□ 0.66
DDX11Q96FC9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 AC016027.1-202ENST00000607927 1699 ntBASIC19.16■□□□□ 0.66
DDX11Q96FC9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
DDX11Q96FC9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DDX11Q96FC9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 AC022188.1-201ENST00000620960 1664 ntBASIC19.15■□□□□ 0.66
DDX11Q96FC9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 TREML5P-201ENST00000421694 576 ntBASIC19.15■□□□□ 0.66
DDX11Q96FC9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DDX11Q96FC9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
DDX11Q96FC9 FO538757.1-201ENST00000623083 1397 ntBASIC19.15■□□□□ 0.66
DDX11Q96FC9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms