Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL391005.1-201ENST00000623953 2435 ntBASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ECHDC3Q96DC8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 AC026691.1-201ENST00000602502 2017 ntBASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 AC136604.1-201ENST00000418535 575 ntBASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 HNRNPUP1-201ENST00000554987 333 ntBASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 MIR4745-201ENST00000577608 62 ntBASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 RN7SL204P-201ENST00000582831 262 ntBASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 AC092364.2-202ENST00000597012 1073 ntBASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ECHDC3Q96DC8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 AC097359.3-201ENST00000603982 1210 ntBASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 AC074044.1-201ENST00000609673 707 ntBASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 AL109936.8-201ENST00000641772 604 ntBASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ECHDC3Q96DC8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ECHDC3Q96DC8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ECHDC3Q96DC8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ECHDC3Q96DC8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ECHDC3Q96DC8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ECHDC3Q96DC8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.02■□□□□ 0.15
ECHDC3Q96DC8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ECHDC3Q96DC8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ECHDC3Q96DC8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ECHDC3Q96DC8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ECHDC3Q96DC8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ECHDC3Q96DC8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ECHDC3Q96DC8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ECHDC3Q96DC8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.01■□□□□ 0.15
ECHDC3Q96DC8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
ECHDC3Q96DC8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ECHDC3Q96DC8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
ECHDC3Q96DC8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.01■□□□□ 0.15
ECHDC3Q96DC8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ECHDC3Q96DC8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ECHDC3Q96DC8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ECHDC3Q96DC8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms