Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.12■□□□□ 0.33
DDX1Q92499 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.12■□□□□ 0.33
DDX1Q92499 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DDX1Q92499 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.12■□□□□ 0.33
DDX1Q92499 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DDX1Q92499 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DDX1Q92499 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.11■□□□□ 0.33
DDX1Q92499 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
DDX1Q92499 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
DDX1Q92499 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
DDX1Q92499 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DDX1Q92499 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 AL627223.1-201ENST00000416693 442 ntBASIC17.11■□□□□ 0.33
DDX1Q92499 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.11■□□□□ 0.33
DDX1Q92499 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.11■□□□□ 0.33
DDX1Q92499 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.11■□□□□ 0.33
DDX1Q92499 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.11■□□□□ 0.33
DDX1Q92499 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.11■□□□□ 0.33
DDX1Q92499 AC243562.2-201ENST00000561247 970 ntBASIC17.11■□□□□ 0.33
DDX1Q92499 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.11■□□□□ 0.33
DDX1Q92499 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.11■□□□□ 0.33
DDX1Q92499 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 AC018892.3-201ENST00000623986 2499 ntBASIC17.11■□□□□ 0.33
DDX1Q92499 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.11■□□□□ 0.33
DDX1Q92499 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.11■□□□□ 0.33
DDX1Q92499 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DDX1Q92499 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DDX1Q92499 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
DDX1Q92499 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.1■□□□□ 0.33
DDX1Q92499 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
DDX1Q92499 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DDX1Q92499 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.1■□□□□ 0.33
DDX1Q92499 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
DDX1Q92499 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.1■□□□□ 0.33
DDX1Q92499 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.1■□□□□ 0.33
DDX1Q92499 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DDX1Q92499 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.1■□□□□ 0.33
DDX1Q92499 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.1■□□□□ 0.33
DDX1Q92499 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.1■□□□□ 0.33
DDX1Q92499 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.1■□□□□ 0.33
DDX1Q92499 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.1■□□□□ 0.33
DDX1Q92499 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DDX1Q92499 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.1■□□□□ 0.33
DDX1Q92499 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.1■□□□□ 0.33
DDX1Q92499 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.1■□□□□ 0.33
DDX1Q92499 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.1■□□□□ 0.33
DDX1Q92499 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
DDX1Q92499 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.1■□□□□ 0.33
DDX1Q92499 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
DDX1Q92499 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 AC092384.3-202ENST00000564646 2873 ntBASIC17.1■□□□□ 0.33
DDX1Q92499 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DDX1Q92499 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
DDX1Q92499 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX1Q92499 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DDX1Q92499 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DDX1Q92499 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DDX1Q92499 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX1Q92499 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
DDX1Q92499 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DDX1Q92499 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX1Q92499 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DDX1Q92499 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.09■□□□□ 0.33
DDX1Q92499 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.09■□□□□ 0.33
DDX1Q92499 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DDX1Q92499 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX1Q92499 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DDX1Q92499 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.09■□□□□ 0.33
DDX1Q92499 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DDX1Q92499 AC004987.2-201ENST00000395959 1148 ntBASIC17.09■□□□□ 0.33
DDX1Q92499 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.09■□□□□ 0.33
DDX1Q92499 AC055876.3-201ENST00000431496 288 ntBASIC17.09■□□□□ 0.33
DDX1Q92499 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms