Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.58■□□□□ 0.25
SCG3Q8WXD2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SCG3Q8WXD2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.58■□□□□ 0.25
SCG3Q8WXD2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCG3Q8WXD2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCG3Q8WXD2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCG3Q8WXD2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCG3Q8WXD2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCG3Q8WXD2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SCG3Q8WXD2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 AC004461.1-201ENST00000412461 403 ntBASIC16.58■□□□□ 0.24
SCG3Q8WXD2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 CYMP-203ENST00000474680 1263 ntBASIC16.58■□□□□ 0.24
SCG3Q8WXD2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 AC026120.1-201ENST00000611536 926 ntBASIC16.58■□□□□ 0.24
SCG3Q8WXD2 AL161645.1-201ENST00000622716 1255 ntBASIC16.58■□□□□ 0.24
SCG3Q8WXD2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 AL671710.1-201ENST00000610245 2349 ntBASIC16.58■□□□□ 0.24
SCG3Q8WXD2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCG3Q8WXD2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 SPDYE11-202ENST00000450699 704 ntBASIC16.57■□□□□ 0.24
SCG3Q8WXD2 TIMM8BP1-201ENST00000452384 211 ntBASIC16.57■□□□□ 0.24
SCG3Q8WXD2 RN7SL589P-201ENST00000481268 310 ntBASIC16.57■□□□□ 0.24
SCG3Q8WXD2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.57■□□□□ 0.24
SCG3Q8WXD2 SPDYE9P-201ENST00000570642 692 ntBASIC16.57■□□□□ 0.24
SCG3Q8WXD2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 AC027612.4-201ENST00000605371 583 ntBASIC16.57■□□□□ 0.24
SCG3Q8WXD2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 AC021097.1-201ENST00000607902 574 ntBASIC16.57■□□□□ 0.24
SCG3Q8WXD2 SPDYE10P-202ENST00000612005 668 ntBASIC16.57■□□□□ 0.24
SCG3Q8WXD2 SPDYE8P-202ENST00000612377 668 ntBASIC16.57■□□□□ 0.24
SCG3Q8WXD2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SCG3Q8WXD2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms