Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 AC007686.3-201ENST00000619017 3487 ntBASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 AP002383.4-201ENST00000442518 975 ntBASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 AC092329.2-201ENST00000598402 547 ntBASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 AC004706.3-202ENST00000621574 984 ntBASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.04■□□□□ 0.16
CKAP2Q8WWK9 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 AC074051.2-201ENST00000565115 352 ntBASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 AJ011931.1-201ENST00000618749 2492 ntBASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.03■□□□□ 0.16
CKAP2Q8WWK9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 AC129492.6-201ENST00000611383 1305 ntBASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 TSSC2-201ENST00000450217 709 ntBASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 AC139887.3-201ENST00000568585 713 ntBASIC16.02■□□□□ 0.16
CKAP2Q8WWK9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms