Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC20.93■□□□□ 0.94
COL22A1Q8NFW1 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC20.93■□□□□ 0.94
COL22A1Q8NFW1 EIF3FP3-201ENST00000434851 1086 ntBASIC20.93■□□□□ 0.94
COL22A1Q8NFW1 FGFR3P1-201ENST00000449999 601 ntBASIC20.93■□□□□ 0.94
COL22A1Q8NFW1 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.93■□□□□ 0.94
COL22A1Q8NFW1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
COL22A1Q8NFW1 AC019193.1-201ENST00000506678 823 ntBASIC20.93■□□□□ 0.94
COL22A1Q8NFW1 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC20.93■□□□□ 0.94
COL22A1Q8NFW1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL22A1Q8NFW1 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC20.93■□□□□ 0.94
COL22A1Q8NFW1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 Z97180.1-201ENST00000445173 988 ntBASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 NOC2LP1-201ENST00000450578 752 ntBASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 AC005740.2-201ENST00000511085 419 ntBASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 PTK2-225ENST00000520892 571 ntTSL 4 BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.92■□□□□ 0.94
COL22A1Q8NFW1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 TPM3P8-201ENST00000330554 643 ntBASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 CHMP1AP1-201ENST00000445563 662 ntBASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL22A1Q8NFW1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 PFN2-202ENST00000423691 911 ntTSL 2 BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 GHSR-202ENST00000427970 912 ntBASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 AC100850.1-201ENST00000506768 649 ntBASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 CENPX-208ENST00000584347 799 ntTSL 2 BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 BNIP3P13-201ENST00000599968 566 ntBASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 KRT8P14-201ENST00000414254 1442 ntBASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL22A1Q8NFW1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 AC114812.1-204ENST00000449669 728 ntBASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 MIR4783-201ENST00000580343 82 ntBASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COL22A1Q8NFW1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
COL22A1Q8NFW1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.89■□□□□ 0.93
COL22A1Q8NFW1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL22A1Q8NFW1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL22A1Q8NFW1 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COL22A1Q8NFW1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COL22A1Q8NFW1 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms