Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 MTND6P24-201ENST00000440466 518 ntBASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 AL096865.1-201ENST00000606796 927 ntBASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 AL133215.2-201ENST00000609242 977 ntBASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 BNIP3P1-202ENST00000550043 1585 ntBASIC16.94■□□□□ 0.3
SCUBE3Q8IX30 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 AL035456.1-201ENST00000456064 1369 ntBASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 KLF2P3-201ENST00000451977 1087 ntBASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 AC051619.7-201ENST00000568314 623 ntBASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 AC015911.4-201ENST00000588022 1070 ntBASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 CYP4F24P-201ENST00000586049 1580 ntBASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.93■□□□□ 0.3
SCUBE3Q8IX30 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 AC004987.2-201ENST00000395959 1148 ntBASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 FAM86GP-201ENST00000448322 971 ntBASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 DUX4L27-201ENST00000554796 1261 ntBASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 AC243562.2-201ENST00000561247 970 ntBASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SCUBE3Q8IX30 AP001282.1-201ENST00000531301 1499 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms