Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AL603832.2-201ENST00000566195 2125 ntBASIC16.08■□□□□ 0.16
APLFQ8IW19 AC023141.13-201ENST00000604991 943 ntBASIC16.08■□□□□ 0.16
APLFQ8IW19 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
APLFQ8IW19 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
APLFQ8IW19 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
APLFQ8IW19 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
APLFQ8IW19 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.08■□□□□ 0.16
APLFQ8IW19 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
APLFQ8IW19 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.08■□□□□ 0.16
APLFQ8IW19 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.08■□□□□ 0.16
APLFQ8IW19 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.08■□□□□ 0.16
APLFQ8IW19 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
APLFQ8IW19 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
APLFQ8IW19 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.08■□□□□ 0.16
APLFQ8IW19 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 AL122018.1-201ENST00000446607 2310 ntBASIC16.07■□□□□ 0.16
APLFQ8IW19 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.07■□□□□ 0.16
APLFQ8IW19 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
APLFQ8IW19 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.07■□□□□ 0.16
APLFQ8IW19 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.07■□□□□ 0.16
APLFQ8IW19 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 FAM58CP-201ENST00000435741 640 ntBASIC16.07■□□□□ 0.16
APLFQ8IW19 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
APLFQ8IW19 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.07■□□□□ 0.16
APLFQ8IW19 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 AC027612.4-201ENST00000605371 583 ntBASIC16.07■□□□□ 0.16
APLFQ8IW19 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.07■□□□□ 0.16
APLFQ8IW19 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.07■□□□□ 0.16
APLFQ8IW19 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.07■□□□□ 0.16
APLFQ8IW19 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.07■□□□□ 0.16
APLFQ8IW19 AC025580.3-201ENST00000617932 1424 ntBASIC16.07■□□□□ 0.16
APLFQ8IW19 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.07■□□□□ 0.16
APLFQ8IW19 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
APLFQ8IW19 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
APLFQ8IW19 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.07■□□□□ 0.16
APLFQ8IW19 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.07■□□□□ 0.16
APLFQ8IW19 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
APLFQ8IW19 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
APLFQ8IW19 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
APLFQ8IW19 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
APLFQ8IW19 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
APLFQ8IW19 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
APLFQ8IW19 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.06■□□□□ 0.16
APLFQ8IW19 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.06■□□□□ 0.16
APLFQ8IW19 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
APLFQ8IW19 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.06■□□□□ 0.16
APLFQ8IW19 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.06■□□□□ 0.16
APLFQ8IW19 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.06■□□□□ 0.16
APLFQ8IW19 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
APLFQ8IW19 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.06■□□□□ 0.16
APLFQ8IW19 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
APLFQ8IW19 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.06■□□□□ 0.16
APLFQ8IW19 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.06■□□□□ 0.16
APLFQ8IW19 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.06■□□□□ 0.16
APLFQ8IW19 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
APLFQ8IW19 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.06■□□□□ 0.16
APLFQ8IW19 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
APLFQ8IW19 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.06■□□□□ 0.16
APLFQ8IW19 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.06■□□□□ 0.16
APLFQ8IW19 AL139327.4-201ENST00000612362 153 ntBASIC16.06■□□□□ 0.16
APLFQ8IW19 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
APLFQ8IW19 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
APLFQ8IW19 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.06■□□□□ 0.16
APLFQ8IW19 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.06■□□□□ 0.16
APLFQ8IW19 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
APLFQ8IW19 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.06■□□□□ 0.16
APLFQ8IW19 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.06■□□□□ 0.16
APLFQ8IW19 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APLFQ8IW19 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.05■□□□□ 0.16
APLFQ8IW19 AC067930.6-201ENST00000623257 4947 ntBASIC16.05■□□□□ 0.16
APLFQ8IW19 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
APLFQ8IW19 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms