Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX6Q8HWS3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX6Q8HWS3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX6Q8HWS3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.8■□□□□ 0.28
RFX6Q8HWS3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.8■□□□□ 0.28
RFX6Q8HWS3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
RFX6Q8HWS3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RFX6Q8HWS3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.79■□□□□ 0.28
RFX6Q8HWS3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.79■□□□□ 0.28
RFX6Q8HWS3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 AL135744.1-201ENST00000565098 629 ntBASIC16.79■□□□□ 0.28
RFX6Q8HWS3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.79■□□□□ 0.28
RFX6Q8HWS3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.78■□□□□ 0.28
RFX6Q8HWS3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 TFAMP1-201ENST00000412727 736 ntBASIC16.78■□□□□ 0.28
RFX6Q8HWS3 AL355306.1-201ENST00000415580 579 ntBASIC16.78■□□□□ 0.28
RFX6Q8HWS3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.78■□□□□ 0.28
RFX6Q8HWS3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 AKAP8P1-201ENST00000434743 1349 ntBASIC16.77■□□□□ 0.28
RFX6Q8HWS3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFX6Q8HWS3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms