Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 BANF1P1-201ENST00000553684 263 ntBASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 AL365203.3-201ENST00000609742 2057 ntBASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 AC112504.1-201ENST00000623415 1841 ntBASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAB11FIP4Q86YS3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 AC018892.3-201ENST00000623986 2499 ntBASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 Z92544.3-201ENST00000624747 417 ntBASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 AC079781.4-201ENST00000641908 219 ntBASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RAB11FIP4Q86YS3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 HAUS4P1-201ENST00000406739 1145 ntBASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 AC004449.1-201ENST00000564240 433 ntBASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 AL365330.1-201ENST00000607459 531 ntBASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 KRT18P28-201ENST00000453838 1332 ntBASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB11FIP4Q86YS3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB11FIP4Q86YS3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
RAB11FIP4Q86YS3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms