Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC25Q86WR0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.71■□□□□ 0.26
CCDC25Q86WR0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.71■□□□□ 0.26
CCDC25Q86WR0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CCDC25Q86WR0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.7■□□□□ 0.26
CCDC25Q86WR0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 AC020658.6-201ENST00000623564 1870 ntBASIC16.7■□□□□ 0.26
CCDC25Q86WR0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 LAGE3P1-201ENST00000425356 484 ntBASIC16.7■□□□□ 0.26
CCDC25Q86WR0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 AC021087.4-201ENST00000563761 564 ntBASIC16.7■□□□□ 0.26
CCDC25Q86WR0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC25Q86WR0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.69■□□□□ 0.26
CCDC25Q86WR0 KRT18P31-201ENST00000506277 1292 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms