Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 MTND1P31-201ENST00000449206 961 ntBASIC13.31□□□□□ -0.28
TREML4Q6UXN2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 CXCL1P1-201ENST00000502804 216 ntBASIC13.31□□□□□ -0.28
TREML4Q6UXN2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 OR7E47P-204ENST00000575924 449 ntBASIC13.31□□□□□ -0.28
TREML4Q6UXN2 LINC02560-201ENST00000596379 459 ntBASIC13.31□□□□□ -0.28
TREML4Q6UXN2 AL356094.1-201ENST00000624663 1212 ntBASIC13.31□□□□□ -0.28
TREML4Q6UXN2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 AC006277.1-201ENST00000624348 1610 ntBASIC13.31□□□□□ -0.28
TREML4Q6UXN2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.31□□□□□ -0.28
TREML4Q6UXN2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 AL691447.1-201ENST00000419456 387 ntBASIC13.3□□□□□ -0.28
TREML4Q6UXN2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 CR383656.12-201ENST00000549567 513 ntBASIC13.3□□□□□ -0.28
TREML4Q6UXN2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 AC051619.7-201ENST00000568314 623 ntBASIC13.3□□□□□ -0.28
TREML4Q6UXN2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.3□□□□□ -0.28
TREML4Q6UXN2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 TUBB3P1-201ENST00000405796 1332 ntBASIC13.3□□□□□ -0.28
TREML4Q6UXN2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 GGT3P-204ENST00000453783 1664 ntBASIC13.3□□□□□ -0.28
TREML4Q6UXN2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.3□□□□□ -0.28
TREML4Q6UXN2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.29□□□□□ -0.28
TREML4Q6UXN2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.29□□□□□ -0.28
TREML4Q6UXN2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.29□□□□□ -0.28
TREML4Q6UXN2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TREML4Q6UXN2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TREML4Q6UXN2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TREML4Q6UXN2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms