Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 MYO15B-237ENST00000642007 4893 ntBASIC15.24■□□□□ 0.03
LPCAT4Q643R3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPCAT4Q643R3 MROH4P-201ENST00000431302 1578 ntBASIC15.24■□□□□ 0.03
LPCAT4Q643R3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.23■□□□□ 0.03
LPCAT4Q643R3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 CYP2A7P1-201ENST00000595391 815 ntBASIC15.23■□□□□ 0.03
LPCAT4Q643R3 AC020765.3-201ENST00000613051 740 ntBASIC15.23■□□□□ 0.03
LPCAT4Q643R3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LPCAT4Q643R3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.22■□□□□ 0.03
LPCAT4Q643R3 PTENP1-202ENST00000532280 3996 ntBASIC15.22■□□□□ 0.03
LPCAT4Q643R3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LPCAT4Q643R3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms