Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 AC105917.1-201ENST00000506637 2539 ntBASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN20Q4JDL3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 AC069262.1-201ENST00000539058 672 ntBASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 AC006538.3-201ENST00000612495 578 ntBASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PTPN20Q4JDL3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 KRT8P37-201ENST00000451609 1420 ntBASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 SPDYE7P-202ENST00000420373 878 ntBASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 RN7SL828P-201ENST00000607615 303 ntBASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 Z92544.3-201ENST00000624747 417 ntBASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN20Q4JDL3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.89■□□□□ 0.3
PTPN20Q4JDL3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTPN20Q4JDL3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.89■□□□□ 0.29
PTPN20Q4JDL3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms