Protein–RNA interactions for Protein: Q32MZ4

LRRFIP1, Leucine-rich repeat flightless-interacting protein 1, humanhuman

Known RBP Predictions only

Length 808 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1Q32MZ4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRFIP1Q32MZ4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRFIP1Q32MZ4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 SERBP1P3-201ENST00000459980 809 ntBASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 RFPL4AP1-201ENST00000530883 850 ntBASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 AL079307.3-201ENST00000556114 283 ntBASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 AC073592.8-201ENST00000624126 511 ntBASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 FO538757.1-201ENST00000623083 1397 ntBASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 AL136982.4-201ENST00000437689 1740 ntBASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRFIP1Q32MZ4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 FO393414.2-201ENST00000405153 598 ntBASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 AC069224.1-201ENST00000566372 1715 ntBASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 KRT8P12-202ENST00000472924 1397 ntBASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRRFIP1Q32MZ4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 EEF1DP4-201ENST00000446006 880 ntBASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 AC106028.4-201ENST00000614509 607 ntBASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRFIP1Q32MZ4 KRT8P37-201ENST00000451609 1420 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms