Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PRAMEP78395 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEP78395 CDC14C-201ENST00000428251 1719 ntBASIC16.31■□□□□ 0.2
PRAMEP78395 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEP78395 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEP78395 AL589702.1-201ENST00000641229 1509 ntBASIC16.31■□□□□ 0.2
PRAMEP78395 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEP78395 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEP78395 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEP78395 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEP78395 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PRAMEP78395 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEP78395 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEP78395 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.31■□□□□ 0.2
PRAMEP78395 FAM86C2P-203ENST00000528684 1004 ntBASIC16.31■□□□□ 0.2
PRAMEP78395 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.31■□□□□ 0.2
PRAMEP78395 AL135744.1-201ENST00000565098 629 ntBASIC16.31■□□□□ 0.2
PRAMEP78395 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEP78395 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEP78395 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEP78395 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEP78395 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEP78395 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEP78395 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEP78395 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PRAMEP78395 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEP78395 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEP78395 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEP78395 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEP78395 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEP78395 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEP78395 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEP78395 DBET-201ENST00000630918 3363 ntBASIC16.3■□□□□ 0.2
PRAMEP78395 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.3■□□□□ 0.2
PRAMEP78395 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.3■□□□□ 0.2
PRAMEP78395 TFAMP1-201ENST00000412727 736 ntBASIC16.3■□□□□ 0.2
PRAMEP78395 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEP78395 MCCD1P2-201ENST00000423228 335 ntBASIC16.3■□□□□ 0.2
PRAMEP78395 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEP78395 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEP78395 PGAM5P1-201ENST00000518923 814 ntBASIC16.3■□□□□ 0.2
PRAMEP78395 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.3■□□□□ 0.2
PRAMEP78395 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEP78395 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEP78395 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEP78395 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEP78395 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEP78395 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEP78395 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEP78395 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
PRAMEP78395 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEP78395 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEP78395 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEP78395 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEP78395 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEP78395 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEP78395 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEP78395 YBX2P1-201ENST00000394192 760 ntBASIC16.29■□□□□ 0.2
PRAMEP78395 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.29■□□□□ 0.2
PRAMEP78395 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEP78395 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEP78395 AC004832.2-201ENST00000426397 482 ntBASIC16.29■□□□□ 0.2
PRAMEP78395 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.29■□□□□ 0.2
PRAMEP78395 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PRAMEP78395 RN7SL589P-201ENST00000481268 310 ntBASIC16.29■□□□□ 0.2
PRAMEP78395 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.29■□□□□ 0.2
PRAMEP78395 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEP78395 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEP78395 AC092902.6-201ENST00000641783 218 ntBASIC16.29■□□□□ 0.2
PRAMEP78395 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEP78395 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms