Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 RNA5SP410-201ENST00000516285 106 ntBASIC14.09□□□□□ -0.15
HIST1H3AP68431 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 AC022145.2-201ENST00000598203 171 ntBASIC14.09□□□□□ -0.15
HIST1H3AP68431 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 AL513210.1-201ENST00000629608 234 ntBASIC14.09□□□□□ -0.15
HIST1H3AP68431 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HIST1H3AP68431 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.08□□□□□ -0.15
HIST1H3AP68431 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.08□□□□□ -0.15
HIST1H3AP68431 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
HIST1H3AP68431 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
HIST1H3AP68431 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.08□□□□□ -0.15
HIST1H3AP68431 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HIST1H3AP68431 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 AC008741.2-201ENST00000612792 3115 ntBASIC14.08□□□□□ -0.16
HIST1H3AP68431 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 AC004987.2-201ENST00000395959 1148 ntBASIC14.08□□□□□ -0.16
HIST1H3AP68431 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 SLC25A39P2-201ENST00000537614 270 ntBASIC14.08□□□□□ -0.16
HIST1H3AP68431 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 AC055717.3-201ENST00000622967 595 ntBASIC14.08□□□□□ -0.16
HIST1H3AP68431 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 AP3S2-216ENST00000617003 1561 ntBASIC14.08□□□□□ -0.16
HIST1H3AP68431 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST1H3AP68431 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H3AP68431 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HIST1H3AP68431 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.07□□□□□ -0.16
HIST1H3AP68431 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms