Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.19□□□□□ -0.14
SEC61A1P61619 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.19□□□□□ -0.14
SEC61A1P61619 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC61A1P61619 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC61A1P61619 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC61A1P61619 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 RPSAP43-201ENST00000402237 625 ntBASIC14.19□□□□□ -0.14
SEC61A1P61619 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SEC61A1P61619 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.19□□□□□ -0.14
SEC61A1P61619 UPF3AP3-201ENST00000420996 769 ntBASIC14.19□□□□□ -0.14
SEC61A1P61619 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.19□□□□□ -0.14
SEC61A1P61619 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.19□□□□□ -0.14
SEC61A1P61619 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.19□□□□□ -0.14
SEC61A1P61619 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.19□□□□□ -0.14
SEC61A1P61619 AC112482.1-201ENST00000492080 688 ntBASIC14.19□□□□□ -0.14
SEC61A1P61619 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.19□□□□□ -0.14
SEC61A1P61619 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
SEC61A1P61619 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC61A1P61619 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SEC61A1P61619 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.19□□□□□ -0.14
SEC61A1P61619 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.19□□□□□ -0.14
SEC61A1P61619 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC61A1P61619 AC004877.2-201ENST00000623941 599 ntBASIC14.19□□□□□ -0.14
SEC61A1P61619 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 AC010491.1-201ENST00000563101 2797 ntBASIC14.19□□□□□ -0.14
SEC61A1P61619 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 AC002310.6-201ENST00000624451 1377 ntBASIC14.19□□□□□ -0.14
SEC61A1P61619 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC61A1P61619 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SEC61A1P61619 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.19□□□□□ -0.14
SEC61A1P61619 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEC61A1P61619 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.18□□□□□ -0.14
SEC61A1P61619 BCAR1-209ENST00000546196 1340 ntBASIC14.18□□□□□ -0.14
SEC61A1P61619 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.18□□□□□ -0.14
SEC61A1P61619 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.18□□□□□ -0.14
SEC61A1P61619 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.18□□□□□ -0.14
SEC61A1P61619 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.18□□□□□ -0.14
SEC61A1P61619 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.18□□□□□ -0.14
SEC61A1P61619 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.18□□□□□ -0.14
SEC61A1P61619 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.18□□□□□ -0.14
SEC61A1P61619 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SEC61A1P61619 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 AL021920.2-201ENST00000624828 1351 ntBASIC14.18□□□□□ -0.14
SEC61A1P61619 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SEC61A1P61619 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.18□□□□□ -0.14
SEC61A1P61619 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 AL596087.1-201ENST00000400979 1969 ntBASIC14.18□□□□□ -0.14
SEC61A1P61619 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SEC61A1P61619 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
SEC61A1P61619 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SEC61A1P61619 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEC61A1P61619 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms