Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.21□□□□□ -0.29
SPCS3P61009 AL358472.4-201ENST00000633140 710 ntBASIC13.21□□□□□ -0.29
SPCS3P61009 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.21□□□□□ -0.29
SPCS3P61009 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SPCS3P61009 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.21□□□□□ -0.29
SPCS3P61009 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SPCS3P61009 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.21□□□□□ -0.3
SPCS3P61009 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.21□□□□□ -0.3
SPCS3P61009 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
SPCS3P61009 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.21□□□□□ -0.3
SPCS3P61009 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SPCS3P61009 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SPCS3P61009 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SPCS3P61009 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.21□□□□□ -0.3
SPCS3P61009 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
SPCS3P61009 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SPCS3P61009 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
SPCS3P61009 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SPCS3P61009 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SPCS3P61009 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.2□□□□□ -0.3
SPCS3P61009 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.2□□□□□ -0.3
SPCS3P61009 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.2□□□□□ -0.3
SPCS3P61009 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SPCS3P61009 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.2□□□□□ -0.3
SPCS3P61009 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.2□□□□□ -0.3
SPCS3P61009 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.2□□□□□ -0.3
SPCS3P61009 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.2□□□□□ -0.3
SPCS3P61009 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SPCS3P61009 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.2□□□□□ -0.3
SPCS3P61009 ELK2BP-201ENST00000415014 1224 ntBASIC13.2□□□□□ -0.3
SPCS3P61009 LAGE3P1-201ENST00000425356 484 ntBASIC13.2□□□□□ -0.3
SPCS3P61009 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
SPCS3P61009 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 FGFR3P6-201ENST00000457012 610 ntBASIC13.2□□□□□ -0.3
SPCS3P61009 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.2□□□□□ -0.3
SPCS3P61009 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.2□□□□□ -0.3
SPCS3P61009 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.2□□□□□ -0.3
SPCS3P61009 AC008608.2-201ENST00000606089 416 ntBASIC13.2□□□□□ -0.3
SPCS3P61009 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.2□□□□□ -0.3
SPCS3P61009 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SPCS3P61009 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.2□□□□□ -0.3
SPCS3P61009 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 AC006058.4-201ENST00000624016 1670 ntBASIC13.2□□□□□ -0.3
SPCS3P61009 U82695.1-201ENST00000635752 1889 ntBASIC13.2□□□□□ -0.3
SPCS3P61009 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SPCS3P61009 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SPCS3P61009 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SPCS3P61009 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SPCS3P61009 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
SPCS3P61009 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.2□□□□□ -0.3
SPCS3P61009 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
SPCS3P61009 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.19□□□□□ -0.3
SPCS3P61009 AC026748.1-201ENST00000624349 3251 ntBASIC13.19□□□□□ -0.3
SPCS3P61009 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
SPCS3P61009 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SPCS3P61009 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.19□□□□□ -0.3
SPCS3P61009 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
SPCS3P61009 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.19□□□□□ -0.3
SPCS3P61009 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.19□□□□□ -0.3
SPCS3P61009 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SPCS3P61009 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.19□□□□□ -0.3
SPCS3P61009 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.19□□□□□ -0.3
SPCS3P61009 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.19□□□□□ -0.3
SPCS3P61009 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.19□□□□□ -0.3
SPCS3P61009 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms