Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 MIR346-201ENST00000362234 95 ntBASIC14.82□□□□□ -0.04
CLDN20P56880 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN20P56880 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN20P56880 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN20P56880 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN20P56880 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN20P56880 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.82□□□□□ -0.04
CLDN20P56880 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN20P56880 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN20P56880 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.82□□□□□ -0.04
CLDN20P56880 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.82□□□□□ -0.04
CLDN20P56880 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN20P56880 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN20P56880 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN20P56880 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.82□□□□□ -0.04
CLDN20P56880 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN20P56880 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN20P56880 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN20P56880 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 TNRC18P2-201ENST00000417666 2714 ntBASIC14.82□□□□□ -0.04
CLDN20P56880 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN20P56880 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 PCGF3-213ENST00000620529 1899 ntBASIC14.82□□□□□ -0.04
CLDN20P56880 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN20P56880 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN20P56880 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLDN20P56880 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN20P56880 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN20P56880 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN20P56880 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
CLDN20P56880 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLDN20P56880 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLDN20P56880 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN20P56880 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 PMS2P2-201ENST00000425039 1128 ntBASIC14.81□□□□□ -0.04
CLDN20P56880 GPS2P2-201ENST00000430745 888 ntBASIC14.81□□□□□ -0.04
CLDN20P56880 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN20P56880 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN20P56880 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 AC105233.2-201ENST00000523697 349 ntBASIC14.81□□□□□ -0.04
CLDN20P56880 AC109322.1-201ENST00000524499 1264 ntBASIC14.81□□□□□ -0.04
CLDN20P56880 AF228730.5-201ENST00000530288 346 ntBASIC14.81□□□□□ -0.04
CLDN20P56880 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN20P56880 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.81□□□□□ -0.04
CLDN20P56880 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN20P56880 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN20P56880 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN20P56880 AC093028.1-201ENST00000622998 982 ntBASIC14.81□□□□□ -0.04
CLDN20P56880 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.81□□□□□ -0.04
CLDN20P56880 LINC00628-201ENST00000628516 1289 ntBASIC14.81□□□□□ -0.04
CLDN20P56880 AC084121.4-201ENST00000641598 221 ntBASIC14.81□□□□□ -0.04
CLDN20P56880 AF228730.8-201ENST00000642140 221 ntBASIC14.81□□□□□ -0.04
CLDN20P56880 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLDN20P56880 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CLDN20P56880 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN20P56880 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN20P56880 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN20P56880 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CLDN20P56880 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CLDN20P56880 ALOX12P2-203ENST00000570921 1945 ntBASIC14.8□□□□□ -0.04
CLDN20P56880 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CLDN20P56880 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN20P56880 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms