Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
AP1S2P56377 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.7■□□□□ 0.1
AP1S2P56377 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP1S2P56377 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP1S2P56377 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
AP1S2P56377 AC004987.2-201ENST00000395959 1148 ntBASIC15.7■□□□□ 0.1
AP1S2P56377 AC211486.1-202ENST00000416371 468 ntBASIC15.7■□□□□ 0.1
AP1S2P56377 RPS8P6-201ENST00000426177 609 ntBASIC15.7■□□□□ 0.1
AP1S2P56377 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.7■□□□□ 0.1
AP1S2P56377 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.7■□□□□ 0.1
AP1S2P56377 AC211476.1-201ENST00000503899 468 ntBASIC15.7■□□□□ 0.1
AP1S2P56377 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.7■□□□□ 0.1
AP1S2P56377 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.7■□□□□ 0.1
AP1S2P56377 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
AP1S2P56377 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.7■□□□□ 0.1
AP1S2P56377 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.7■□□□□ 0.1
AP1S2P56377 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.7■□□□□ 0.1
AP1S2P56377 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.7■□□□□ 0.1
AP1S2P56377 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP1S2P56377 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.7■□□□□ 0.1
AP1S2P56377 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S2P56377 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S2P56377 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S2P56377 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.69■□□□□ 0.1
AP1S2P56377 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
AP1S2P56377 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
AP1S2P56377 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S2P56377 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S2P56377 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S2P56377 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 AL139010.1-201ENST00000454878 894 ntBASIC15.69■□□□□ 0.1
AP1S2P56377 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.69■□□□□ 0.1
AP1S2P56377 AC092865.5-201ENST00000545435 363 ntBASIC15.69■□□□□ 0.1
AP1S2P56377 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.69■□□□□ 0.1
AP1S2P56377 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S2P56377 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S2P56377 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S2P56377 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
AP1S2P56377 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.69■□□□□ 0.1
AP1S2P56377 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.69■□□□□ 0.1
AP1S2P56377 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.69■□□□□ 0.1
AP1S2P56377 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
AP1S2P56377 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
AP1S2P56377 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.69■□□□□ 0.1
AP1S2P56377 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP1S2P56377 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP1S2P56377 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.68■□□□□ 0.1
AP1S2P56377 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.68■□□□□ 0.1
AP1S2P56377 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S2P56377 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.68■□□□□ 0.1
AP1S2P56377 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S2P56377 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S2P56377 AC008741.2-201ENST00000612792 3115 ntBASIC15.68■□□□□ 0.1
AP1S2P56377 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP1S2P56377 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S2P56377 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S2P56377 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S2P56377 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S2P56377 AC134407.2-201ENST00000625089 1978 ntBASIC15.68■□□□□ 0.1
AP1S2P56377 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S2P56377 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S2P56377 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S2P56377 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S2P56377 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms