Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.44■□□□□ 0.54
HMGCS2P54868 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS2P54868 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HMGCS2P54868 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGCS2P54868 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
HMGCS2P54868 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HMGCS2P54868 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.43■□□□□ 0.54
HMGCS2P54868 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGCS2P54868 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
HMGCS2P54868 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HMGCS2P54868 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 AC005229.1-201ENST00000392885 409 ntBASIC18.43■□□□□ 0.54
HMGCS2P54868 MIR1908-201ENST00000410394 80 ntBASIC18.43■□□□□ 0.54
HMGCS2P54868 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGCS2P54868 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.43■□□□□ 0.54
HMGCS2P54868 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 PHKG1P2-201ENST00000457537 863 ntBASIC18.43■□□□□ 0.54
HMGCS2P54868 VDAC1P7-201ENST00000462417 847 ntBASIC18.43■□□□□ 0.54
HMGCS2P54868 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 FAM8A2P-201ENST00000528813 1142 ntBASIC18.43■□□□□ 0.54
HMGCS2P54868 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.43■□□□□ 0.54
HMGCS2P54868 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.43■□□□□ 0.54
HMGCS2P54868 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.43■□□□□ 0.54
HMGCS2P54868 RN7SL219P-201ENST00000582872 296 ntBASIC18.43■□□□□ 0.54
HMGCS2P54868 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGCS2P54868 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGCS2P54868 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
HMGCS2P54868 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGCS2P54868 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
HMGCS2P54868 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGCS2P54868 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HMGCS2P54868 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HMGCS2P54868 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS2P54868 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGCS2P54868 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS2P54868 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS2P54868 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS2P54868 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS2P54868 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS2P54868 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HMGCS2P54868 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.42■□□□□ 0.54
HMGCS2P54868 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
HMGCS2P54868 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGCS2P54868 RPL13AP25-201ENST00000484130 612 ntBASIC18.42■□□□□ 0.54
HMGCS2P54868 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.42■□□□□ 0.54
HMGCS2P54868 AC120045.2-201ENST00000567334 178 ntBASIC18.42■□□□□ 0.54
HMGCS2P54868 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.42■□□□□ 0.54
HMGCS2P54868 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.42■□□□□ 0.54
HMGCS2P54868 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS2P54868 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS2P54868 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS2P54868 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HMGCS2P54868 REXO1L1P-202ENST00000608646 1974 ntBASIC18.42■□□□□ 0.54
HMGCS2P54868 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HMGCS2P54868 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGCS2P54868 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGCS2P54868 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.41■□□□□ 0.54
HMGCS2P54868 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.41■□□□□ 0.54
HMGCS2P54868 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCS2P54868 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
HMGCS2P54868 AP001282.1-201ENST00000531301 1499 ntBASIC18.41■□□□□ 0.54
HMGCS2P54868 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCS2P54868 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 AC106886.4-201ENST00000623557 2502 ntBASIC18.41■□□□□ 0.54
HMGCS2P54868 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCS2P54868 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGCS2P54868 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.41■□□□□ 0.54
HMGCS2P54868 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 C1QBPP1-201ENST00000400117 770 ntBASIC18.41■□□□□ 0.54
HMGCS2P54868 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGCS2P54868 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms