Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-1P43699 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-1P43699 AC087388.1-201ENST00000571370 1112 ntBASIC13.26□□□□□ -0.29
NKX2-1P43699 AC005332.1-201ENST00000577698 1310 ntBASIC13.26□□□□□ -0.29
NKX2-1P43699 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NKX2-1P43699 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
NKX2-1P43699 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-1P43699 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-1P43699 AC106881.1-201ENST00000605849 3329 ntBASIC13.26□□□□□ -0.29
NKX2-1P43699 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-1P43699 TCAF2P1-201ENST00000291129 2421 ntBASIC13.25□□□□□ -0.29
NKX2-1P43699 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX2-1P43699 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NKX2-1P43699 AC007292.2-201ENST00000593524 1812 ntBASIC13.25□□□□□ -0.29
NKX2-1P43699 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX2-1P43699 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX2-1P43699 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.25□□□□□ -0.29
NKX2-1P43699 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX2-1P43699 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX2-1P43699 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.25□□□□□ -0.29
NKX2-1P43699 BX005266.1-201ENST00000473402 457 ntBASIC13.25□□□□□ -0.29
NKX2-1P43699 FAM86EP-206ENST00000510506 987 ntBASIC13.25□□□□□ -0.29
NKX2-1P43699 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX2-1P43699 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX2-1P43699 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX2-1P43699 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NKX2-1P43699 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NKX2-1P43699 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NKX2-1P43699 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.25□□□□□ -0.29
NKX2-1P43699 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NKX2-1P43699 LINC01101-201ENST00000622953 1884 ntBASIC13.25□□□□□ -0.29
NKX2-1P43699 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX2-1P43699 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-1P43699 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX2-1P43699 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NKX2-1P43699 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NKX2-1P43699 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 AC016734.2-201ENST00000624325 1377 ntBASIC13.24□□□□□ -0.29
NKX2-1P43699 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NKX2-1P43699 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
NKX2-1P43699 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.24□□□□□ -0.29
NKX2-1P43699 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 ARMC10P1-201ENST00000313754 855 ntBASIC13.24□□□□□ -0.29
NKX2-1P43699 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.24□□□□□ -0.29
NKX2-1P43699 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
NKX2-1P43699 HCG4-201ENST00000418983 998 ntBASIC13.24□□□□□ -0.29
NKX2-1P43699 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX2-1P43699 DRAXINP1-201ENST00000437611 948 ntBASIC13.24□□□□□ -0.29
NKX2-1P43699 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX2-1P43699 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.24□□□□□ -0.29
NKX2-1P43699 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms