Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.24■□□□□ 0.35
SSR1P43307 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR1P43307 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR1P43307 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR1P43307 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR1P43307 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSR1P43307 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSR1P43307 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSR1P43307 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SSR1P43307 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.23■□□□□ 0.35
SSR1P43307 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.23■□□□□ 0.35
SSR1P43307 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SSR1P43307 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SSR1P43307 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.23■□□□□ 0.35
SSR1P43307 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.23■□□□□ 0.35
SSR1P43307 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SSR1P43307 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SSR1P43307 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
SSR1P43307 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.23■□□□□ 0.35
SSR1P43307 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.23■□□□□ 0.35
SSR1P43307 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.23■□□□□ 0.35
SSR1P43307 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.23■□□□□ 0.35
SSR1P43307 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SSR1P43307 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.23■□□□□ 0.35
SSR1P43307 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.23■□□□□ 0.35
SSR1P43307 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.23■□□□□ 0.35
SSR1P43307 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.23■□□□□ 0.35
SSR1P43307 AL603832.2-201ENST00000566195 2125 ntBASIC17.23■□□□□ 0.35
SSR1P43307 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSR1P43307 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 AC025580.3-201ENST00000617932 1424 ntBASIC17.22■□□□□ 0.35
SSR1P43307 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.22■□□□□ 0.35
SSR1P43307 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SSR1P43307 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.22■□□□□ 0.35
SSR1P43307 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 RPL13AP23-201ENST00000480739 586 ntBASIC17.22■□□□□ 0.35
SSR1P43307 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.22■□□□□ 0.35
SSR1P43307 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.22■□□□□ 0.35
SSR1P43307 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.22■□□□□ 0.35
SSR1P43307 AL121894.2-201ENST00000602977 491 ntBASIC17.22■□□□□ 0.35
SSR1P43307 AC064836.3-201ENST00000607928 673 ntBASIC17.22■□□□□ 0.35
SSR1P43307 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 AC004877.2-201ENST00000623941 599 ntBASIC17.22■□□□□ 0.35
SSR1P43307 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SSR1P43307 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.22■□□□□ 0.35
SSR1P43307 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.22■□□□□ 0.35
SSR1P43307 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.22■□□□□ 0.35
SSR1P43307 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SSR1P43307 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSR1P43307 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
SSR1P43307 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms