Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SOX6P35712 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.54□□□□□ -0.08
SOX6P35712 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.54□□□□□ -0.08
SOX6P35712 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SOX6P35712 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SOX6P35712 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.54□□□□□ -0.08
SOX6P35712 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SOX6P35712 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SOX6P35712 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SOX6P35712 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.54□□□□□ -0.08
SOX6P35712 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.54□□□□□ -0.08
SOX6P35712 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SOX6P35712 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SOX6P35712 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.53□□□□□ -0.08
SOX6P35712 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.53□□□□□ -0.08
SOX6P35712 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.53□□□□□ -0.08
SOX6P35712 AC132938.5-201ENST00000624980 1813 ntBASIC14.53□□□□□ -0.08
SOX6P35712 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.53□□□□□ -0.08
SOX6P35712 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.53□□□□□ -0.08
SOX6P35712 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.53□□□□□ -0.08
SOX6P35712 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.53□□□□□ -0.08
SOX6P35712 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 MIR1224-201ENST00000408193 85 ntBASIC14.53□□□□□ -0.08
SOX6P35712 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.53□□□□□ -0.08
SOX6P35712 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.53□□□□□ -0.08
SOX6P35712 KRT18P38-201ENST00000449496 1282 ntBASIC14.53□□□□□ -0.08
SOX6P35712 AL671277.2-201ENST00000458060 996 ntBASIC14.53□□□□□ -0.08
SOX6P35712 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.53□□□□□ -0.08
SOX6P35712 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.53□□□□□ -0.08
SOX6P35712 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
SOX6P35712 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.53□□□□□ -0.08
SOX6P35712 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.53□□□□□ -0.08
SOX6P35712 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.53□□□□□ -0.08
SOX6P35712 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.53□□□□□ -0.08
SOX6P35712 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.53□□□□□ -0.08
SOX6P35712 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.53□□□□□ -0.08
SOX6P35712 AC007686.3-201ENST00000619017 3487 ntBASIC14.53□□□□□ -0.08
SOX6P35712 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SOX6P35712 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SOX6P35712 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.53□□□□□ -0.08
SOX6P35712 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SOX6P35712 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SOX6P35712 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.53□□□□□ -0.08
SOX6P35712 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SOX6P35712 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SOX6P35712 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SOX6P35712 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX6P35712 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX6P35712 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SOX6P35712 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
SOX6P35712 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX6P35712 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SOX6P35712 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.52□□□□□ -0.08
SOX6P35712 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX6P35712 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SOX6P35712 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SOX6P35712 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.52□□□□□ -0.08
SOX6P35712 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SOX6P35712 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX6P35712 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX6P35712 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SOX6P35712 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SOX6P35712 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX6P35712 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SOX6P35712 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms