Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.35□□□□□ -0.11
CD40LGP29965 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
CD40LGP29965 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 AP002414.1-201ENST00000391405 1147 ntBASIC14.35□□□□□ -0.11
CD40LGP29965 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
CD40LGP29965 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.35□□□□□ -0.11
CD40LGP29965 AC104076.2-201ENST00000448912 469 ntBASIC14.35□□□□□ -0.11
CD40LGP29965 AL359075.1-203ENST00000462729 1002 ntBASIC14.35□□□□□ -0.11
CD40LGP29965 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.35□□□□□ -0.11
CD40LGP29965 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.35□□□□□ -0.11
CD40LGP29965 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.35□□□□□ -0.11
CD40LGP29965 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.35□□□□□ -0.11
CD40LGP29965 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.35□□□□□ -0.11
CD40LGP29965 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CD40LGP29965 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.35□□□□□ -0.11
CD40LGP29965 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.35□□□□□ -0.11
CD40LGP29965 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.35□□□□□ -0.11
CD40LGP29965 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CD40LGP29965 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.35□□□□□ -0.11
CD40LGP29965 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40LGP29965 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.34□□□□□ -0.11
CD40LGP29965 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40LGP29965 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CD40LGP29965 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CD40LGP29965 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CD40LGP29965 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CD40LGP29965 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CD40LGP29965 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40LGP29965 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.34□□□□□ -0.11
CD40LGP29965 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 AC007967.3-201ENST00000434308 558 ntBASIC14.34□□□□□ -0.11
CD40LGP29965 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.34□□□□□ -0.11
CD40LGP29965 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40LGP29965 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.34□□□□□ -0.11
CD40LGP29965 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.34□□□□□ -0.11
CD40LGP29965 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.34□□□□□ -0.11
CD40LGP29965 ZNF444P1-201ENST00000559497 298 ntBASIC14.34□□□□□ -0.11
CD40LGP29965 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.34□□□□□ -0.11
CD40LGP29965 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
CD40LGP29965 AL136038.4-201ENST00000603606 1261 ntBASIC14.34□□□□□ -0.11
CD40LGP29965 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40LGP29965 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40LGP29965 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.34□□□□□ -0.11
CD40LGP29965 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40LGP29965 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.34□□□□□ -0.11
CD40LGP29965 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.34□□□□□ -0.11
CD40LGP29965 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.34□□□□□ -0.11
CD40LGP29965 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD40LGP29965 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD40LGP29965 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD40LGP29965 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CD40LGP29965 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CD40LGP29965 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD40LGP29965 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD40LGP29965 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CD40LGP29965 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CD40LGP29965 KRT8P39-201ENST00000396270 1433 ntBASIC14.33□□□□□ -0.11
CD40LGP29965 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD40LGP29965 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD40LGP29965 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD40LGP29965 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CD40LGP29965 AC136759.1-202ENST00000530858 2194 ntBASIC14.33□□□□□ -0.11
CD40LGP29965 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 AC092127.1-201ENST00000567093 3455 ntBASIC14.33□□□□□ -0.12
CD40LGP29965 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD40LGP29965 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.33□□□□□ -0.12
CD40LGP29965 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.33□□□□□ -0.12
CD40LGP29965 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms