Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCND1P24385 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCND1P24385 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCND1P24385 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.29■□□□□ 0.2
CCND1P24385 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CCND1P24385 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.29■□□□□ 0.2
CCND1P24385 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCND1P24385 AC106881.1-201ENST00000605849 3329 ntBASIC16.29■□□□□ 0.2
CCND1P24385 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.29■□□□□ 0.2
CCND1P24385 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.29■□□□□ 0.2
CCND1P24385 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.29■□□□□ 0.2
CCND1P24385 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCND1P24385 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.29■□□□□ 0.2
CCND1P24385 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCND1P24385 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.29■□□□□ 0.2
CCND1P24385 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.29■□□□□ 0.2
CCND1P24385 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 BX640515.1-201ENST00000617215 977 ntBASIC16.29■□□□□ 0.2
CCND1P24385 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.29■□□□□ 0.2
CCND1P24385 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCND1P24385 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCND1P24385 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCND1P24385 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCND1P24385 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.28■□□□□ 0.2
CCND1P24385 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCND1P24385 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCND1P24385 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 IL9RP2-201ENST00000423948 1312 ntBASIC16.28■□□□□ 0.2
CCND1P24385 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCND1P24385 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.28■□□□□ 0.2
CCND1P24385 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCND1P24385 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.28■□□□□ 0.2
CCND1P24385 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 AL590627.1-203ENST00000421194 1026 ntBASIC16.28■□□□□ 0.2
CCND1P24385 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.28■□□□□ 0.2
CCND1P24385 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.28■□□□□ 0.2
CCND1P24385 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.28■□□□□ 0.2
CCND1P24385 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.28■□□□□ 0.2
CCND1P24385 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.28■□□□□ 0.2
CCND1P24385 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.28■□□□□ 0.2
CCND1P24385 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.28■□□□□ 0.2
CCND1P24385 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.28■□□□□ 0.2
CCND1P24385 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.28■□□□□ 0.2
CCND1P24385 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.28■□□□□ 0.2
CCND1P24385 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCND1P24385 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCND1P24385 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCND1P24385 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCND1P24385 ZNF259P1-201ENST00000407656 1365 ntBASIC16.27■□□□□ 0.2
CCND1P24385 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCND1P24385 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCND1P24385 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.27■□□□□ 0.2
CCND1P24385 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCND1P24385 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCND1P24385 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CCND1P24385 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCND1P24385 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.27■□□□□ 0.2
CCND1P24385 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCND1P24385 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCND1P24385 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCND1P24385 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCND1P24385 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CCND1P24385 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCND1P24385 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.27■□□□□ 0.2
CCND1P24385 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCND1P24385 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.27■□□□□ 0.2
CCND1P24385 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CCND1P24385 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms