Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC243562.1-201ENST00000560672 389 ntBASIC14.28□□□□□ -0.12
MSR1P21757 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
MSR1P21757 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.28□□□□□ -0.12
MSR1P21757 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.28□□□□□ -0.12
MSR1P21757 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.28□□□□□ -0.12
MSR1P21757 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.28□□□□□ -0.12
MSR1P21757 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MSR1P21757 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
MSR1P21757 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MSR1P21757 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.28□□□□□ -0.12
MSR1P21757 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MSR1P21757 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MSR1P21757 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MSR1P21757 MST1L-201ENST00000442552 2185 ntBASIC14.27□□□□□ -0.12
MSR1P21757 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.27□□□□□ -0.12
MSR1P21757 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.27□□□□□ -0.12
MSR1P21757 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.27□□□□□ -0.12
MSR1P21757 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
MSR1P21757 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MSR1P21757 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.27□□□□□ -0.12
MSR1P21757 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
MSR1P21757 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.27□□□□□ -0.12
MSR1P21757 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MSR1P21757 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MSR1P21757 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
MSR1P21757 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
MSR1P21757 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.27□□□□□ -0.12
MSR1P21757 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MSR1P21757 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
MSR1P21757 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MSR1P21757 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.27□□□□□ -0.12
MSR1P21757 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
MSR1P21757 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.27□□□□□ -0.12
MSR1P21757 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.27□□□□□ -0.13
MSR1P21757 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.27□□□□□ -0.13
MSR1P21757 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.27□□□□□ -0.13
MSR1P21757 AP000347.1-202ENST00000435868 847 ntBASIC14.27□□□□□ -0.13
MSR1P21757 SPCS2P4-201ENST00000436160 681 ntBASIC14.27□□□□□ -0.13
MSR1P21757 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.27□□□□□ -0.13
MSR1P21757 ALG1L5P-201ENST00000482043 771 ntBASIC14.27□□□□□ -0.13
MSR1P21757 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.27□□□□□ -0.13
MSR1P21757 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.27□□□□□ -0.13
MSR1P21757 KRT8P48-201ENST00000515599 1220 ntBASIC14.27□□□□□ -0.13
MSR1P21757 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.27□□□□□ -0.13
MSR1P21757 KRT8P23-201ENST00000560090 1207 ntBASIC14.27□□□□□ -0.13
MSR1P21757 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.27□□□□□ -0.13
MSR1P21757 AC005829.1-201ENST00000570002 483 ntBASIC14.27□□□□□ -0.13
MSR1P21757 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.27□□□□□ -0.13
MSR1P21757 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.27□□□□□ -0.13
MSR1P21757 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
MSR1P21757 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.27□□□□□ -0.13
MSR1P21757 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.27□□□□□ -0.13
MSR1P21757 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.27□□□□□ -0.13
MSR1P21757 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
MSR1P21757 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.27□□□□□ -0.13
MSR1P21757 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
MSR1P21757 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MSR1P21757 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MSR1P21757 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
MSR1P21757 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
MSR1P21757 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 ELL2P1-201ENST00000413990 1906 ntBASIC14.26□□□□□ -0.13
MSR1P21757 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.26□□□□□ -0.13
MSR1P21757 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.26□□□□□ -0.13
MSR1P21757 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MSR1P21757 AC142381.1-201ENST00000426099 345 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms