Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17■□□□□ 0.31
KRT3P12035 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17■□□□□ 0.31
KRT3P12035 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 AP005117.1-202ENST00000581724 1908 ntBASIC17■□□□□ 0.31
KRT3P12035 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17■□□□□ 0.31
KRT3P12035 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
KRT3P12035 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 HLA-H-201ENST00000383620 1096 ntBASIC17■□□□□ 0.31
KRT3P12035 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17■□□□□ 0.31
KRT3P12035 SLC25A39P2-201ENST00000537614 270 ntBASIC17■□□□□ 0.31
KRT3P12035 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17■□□□□ 0.31
KRT3P12035 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17■□□□□ 0.31
KRT3P12035 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17■□□□□ 0.31
KRT3P12035 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17■□□□□ 0.31
KRT3P12035 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17■□□□□ 0.31
KRT3P12035 AL513210.1-201ENST00000629608 234 ntBASIC17■□□□□ 0.31
KRT3P12035 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17■□□□□ 0.31
KRT3P12035 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17■□□□□ 0.31
KRT3P12035 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17■□□□□ 0.31
KRT3P12035 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
KRT3P12035 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
KRT3P12035 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
KRT3P12035 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT3P12035 PRAL-201ENST00000624952 3286 ntBASIC16.99■□□□□ 0.31
KRT3P12035 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
KRT3P12035 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT3P12035 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.99■□□□□ 0.31
KRT3P12035 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT3P12035 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
KRT3P12035 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
KRT3P12035 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 AC005237.2-201ENST00000434368 219 ntBASIC16.99■□□□□ 0.31
KRT3P12035 AC092865.5-201ENST00000545435 363 ntBASIC16.99■□□□□ 0.31
KRT3P12035 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.99■□□□□ 0.31
KRT3P12035 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.99■□□□□ 0.31
KRT3P12035 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
KRT3P12035 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
KRT3P12035 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 CICP6-201ENST00000457191 2729 ntBASIC16.99■□□□□ 0.31
KRT3P12035 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
KRT3P12035 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.99■□□□□ 0.31
KRT3P12035 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
KRT3P12035 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.99■□□□□ 0.31
KRT3P12035 AP001282.1-201ENST00000531301 1499 ntBASIC16.99■□□□□ 0.31
KRT3P12035 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
KRT3P12035 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 AP003680.1-201ENST00000598970 3660 ntBASIC16.98■□□□□ 0.31
KRT3P12035 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.98■□□□□ 0.31
KRT3P12035 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.98■□□□□ 0.31
KRT3P12035 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.98■□□□□ 0.31
KRT3P12035 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.98■□□□□ 0.31
KRT3P12035 AC004461.1-201ENST00000412461 403 ntBASIC16.98■□□□□ 0.31
KRT3P12035 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.98■□□□□ 0.31
KRT3P12035 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.98■□□□□ 0.31
KRT3P12035 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.98■□□□□ 0.31
KRT3P12035 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.98■□□□□ 0.31
KRT3P12035 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.98■□□□□ 0.31
KRT3P12035 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.98■□□□□ 0.31
KRT3P12035 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.98■□□□□ 0.31
KRT3P12035 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
KRT3P12035 AP3S2-216ENST00000617003 1561 ntBASIC16.98■□□□□ 0.31
KRT3P12035 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
KRT3P12035 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.97■□□□□ 0.31
KRT3P12035 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms