Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM1P09493 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.83■□□□□ 0.44
TPM1P09493 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.83■□□□□ 0.44
TPM1P09493 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.83■□□□□ 0.44
TPM1P09493 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.83■□□□□ 0.44
TPM1P09493 AC021097.1-201ENST00000607902 574 ntBASIC17.83■□□□□ 0.44
TPM1P09493 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TPM1P09493 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM1P09493 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TPM1P09493 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TPM1P09493 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM1P09493 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TPM1P09493 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM1P09493 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
TPM1P09493 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.83■□□□□ 0.44
TPM1P09493 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TPM1P09493 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.83■□□□□ 0.44
TPM1P09493 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TPM1P09493 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM1P09493 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TPM1P09493 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM1P09493 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM1P09493 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
TPM1P09493 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM1P09493 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.82■□□□□ 0.44
TPM1P09493 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TPM1P09493 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM1P09493 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
TPM1P09493 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM1P09493 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TPM1P09493 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.82■□□□□ 0.44
TPM1P09493 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM1P09493 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
TPM1P09493 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.82■□□□□ 0.44
TPM1P09493 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TPM1P09493 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.82■□□□□ 0.44
TPM1P09493 AC093458.2-201ENST00000623150 629 ntBASIC17.82■□□□□ 0.44
TPM1P09493 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TPM1P09493 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM1P09493 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM1P09493 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM1P09493 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM1P09493 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
TPM1P09493 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.82■□□□□ 0.44
TPM1P09493 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TPM1P09493 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TPM1P09493 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.82■□□□□ 0.44
TPM1P09493 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM1P09493 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TPM1P09493 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TPM1P09493 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
TPM1P09493 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TPM1P09493 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.81■□□□□ 0.44
TPM1P09493 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.81■□□□□ 0.44
TPM1P09493 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TPM1P09493 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
TPM1P09493 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.81■□□□□ 0.44
TPM1P09493 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.81■□□□□ 0.44
TPM1P09493 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.81■□□□□ 0.44
TPM1P09493 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TPM1P09493 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
TPM1P09493 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.81■□□□□ 0.44
TPM1P09493 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
TPM1P09493 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TPM1P09493 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM1P09493 AC067750.1-201ENST00000608826 6545 ntBASIC17.81■□□□□ 0.44
TPM1P09493 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM1P09493 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM1P09493 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM1P09493 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM1P09493 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM1P09493 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.8■□□□□ 0.44
TPM1P09493 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
TPM1P09493 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM1P09493 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TPM1P09493 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM1P09493 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM1P09493 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM1P09493 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TPM1P09493 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.8■□□□□ 0.44
TPM1P09493 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM1P09493 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM1P09493 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TPM1P09493 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TPM1P09493 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms