Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CTSDP07339 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CTSDP07339 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
CTSDP07339 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.43□□□□□ -0.26
CTSDP07339 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.43□□□□□ -0.26
CTSDP07339 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.43□□□□□ -0.26
CTSDP07339 ELK2BP-201ENST00000415014 1224 ntBASIC13.43□□□□□ -0.26
CTSDP07339 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.43□□□□□ -0.26
CTSDP07339 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.43□□□□□ -0.26
CTSDP07339 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CTSDP07339 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.43□□□□□ -0.26
CTSDP07339 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.43□□□□□ -0.26
CTSDP07339 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.43□□□□□ -0.26
CTSDP07339 AC006504.4-201ENST00000592118 1568 ntBASIC13.43□□□□□ -0.26
CTSDP07339 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.43□□□□□ -0.26
CTSDP07339 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
CTSDP07339 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.43□□□□□ -0.26
CTSDP07339 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CTSDP07339 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CTSDP07339 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CTSDP07339 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.43□□□□□ -0.26
CTSDP07339 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.43□□□□□ -0.26
CTSDP07339 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
CTSDP07339 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 OR2I1P-210ENST00000642037 4691 ntBASIC13.42□□□□□ -0.26
CTSDP07339 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.42□□□□□ -0.26
CTSDP07339 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CTSDP07339 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.42□□□□□ -0.26
CTSDP07339 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CTSDP07339 ATP5G2P1-201ENST00000433580 426 ntBASIC13.42□□□□□ -0.26
CTSDP07339 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.42□□□□□ -0.26
CTSDP07339 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 MTDHP3-201ENST00000594186 672 ntBASIC13.42□□□□□ -0.26
CTSDP07339 MTDHP4-201ENST00000600287 670 ntBASIC13.42□□□□□ -0.26
CTSDP07339 NPAP1P7-201ENST00000613027 823 ntBASIC13.42□□□□□ -0.26
CTSDP07339 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.42□□□□□ -0.26
CTSDP07339 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.42□□□□□ -0.26
CTSDP07339 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.42□□□□□ -0.26
CTSDP07339 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
CTSDP07339 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.42□□□□□ -0.26
CTSDP07339 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 OR2I1P-209ENST00000641730 5365 ntBASIC13.42□□□□□ -0.26
CTSDP07339 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CTSDP07339 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CTSDP07339 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CTSDP07339 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms