Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.15■□□□□ 0.5
TPM3P06753 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.14■□□□□ 0.5
TPM3P06753 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TPM3P06753 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TPM3P06753 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.14■□□□□ 0.49
TPM3P06753 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 AL592424.1-201ENST00000563624 1536 ntBASIC18.14■□□□□ 0.49
TPM3P06753 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.14■□□□□ 0.49
TPM3P06753 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 CICP23-201ENST00000605013 2741 ntBASIC18.14■□□□□ 0.49
TPM3P06753 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TPM3P06753 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TPM3P06753 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.14■□□□□ 0.49
TPM3P06753 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.14■□□□□ 0.49
TPM3P06753 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
TPM3P06753 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.14■□□□□ 0.49
TPM3P06753 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.14■□□□□ 0.49
TPM3P06753 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.14■□□□□ 0.49
TPM3P06753 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TPM3P06753 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.14■□□□□ 0.49
TPM3P06753 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TPM3P06753 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.14■□□□□ 0.49
TPM3P06753 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
TPM3P06753 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TPM3P06753 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.13■□□□□ 0.49
TPM3P06753 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.13■□□□□ 0.49
TPM3P06753 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TPM3P06753 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.13■□□□□ 0.49
TPM3P06753 LINC00528-201ENST00000600723 2160 ntBASIC18.13■□□□□ 0.49
TPM3P06753 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TPM3P06753 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TPM3P06753 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TPM3P06753 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.13■□□□□ 0.49
TPM3P06753 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.13■□□□□ 0.49
TPM3P06753 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
TPM3P06753 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.13■□□□□ 0.49
TPM3P06753 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.13■□□□□ 0.49
TPM3P06753 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.13■□□□□ 0.49
TPM3P06753 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TPM3P06753 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.13■□□□□ 0.49
TPM3P06753 MIR3180-1-201ENST00000580374 94 ntBASIC18.13■□□□□ 0.49
TPM3P06753 MIR3180-3-201ENST00000584616 94 ntBASIC18.13■□□□□ 0.49
TPM3P06753 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.13■□□□□ 0.49
TPM3P06753 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.13■□□□□ 0.49
TPM3P06753 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.13■□□□□ 0.49
TPM3P06753 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.13■□□□□ 0.49
TPM3P06753 AL359258.3-201ENST00000622910 2331 ntBASIC18.13■□□□□ 0.49
TPM3P06753 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.13■□□□□ 0.49
TPM3P06753 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC18.13■□□□□ 0.49
TPM3P06753 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TPM3P06753 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.13■□□□□ 0.49
TPM3P06753 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.13■□□□□ 0.49
TPM3P06753 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TPM3P06753 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TPM3P06753 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TPM3P06753 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TPM3P06753 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM3P06753 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.12■□□□□ 0.49
TPM3P06753 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TPM3P06753 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TPM3P06753 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.12■□□□□ 0.49
TPM3P06753 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM3P06753 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TPM3P06753 PTCHD3P3-201ENST00000403073 906 ntBASIC18.12■□□□□ 0.49
TPM3P06753 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.12■□□□□ 0.49
TPM3P06753 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.12■□□□□ 0.49
TPM3P06753 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.12■□□□□ 0.49
TPM3P06753 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms