Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TUBB4AP04350 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TUBB4AP04350 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBB4AP04350 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.32■□□□□ 0.36
TUBB4AP04350 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TUBB4AP04350 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBB4AP04350 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBB4AP04350 AC063952.2-201ENST00000498792 1227 ntBASIC17.32■□□□□ 0.36
TUBB4AP04350 AC022616.7-201ENST00000525383 220 ntBASIC17.32■□□□□ 0.36
TUBB4AP04350 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.32■□□□□ 0.36
TUBB4AP04350 NTF6B-201ENST00000591913 560 ntBASIC17.32■□□□□ 0.36
TUBB4AP04350 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TUBB4AP04350 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.32■□□□□ 0.36
TUBB4AP04350 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBB4AP04350 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.32■□□□□ 0.36
TUBB4AP04350 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TUBB4AP04350 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TUBB4AP04350 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.32■□□□□ 0.36
TUBB4AP04350 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TUBB4AP04350 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TUBB4AP04350 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
TUBB4AP04350 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TUBB4AP04350 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.31■□□□□ 0.36
TUBB4AP04350 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBB4AP04350 MYO15B-237ENST00000642007 4893 ntBASIC17.31■□□□□ 0.36
TUBB4AP04350 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBB4AP04350 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBB4AP04350 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBB4AP04350 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBB4AP04350 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBB4AP04350 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TUBB4AP04350 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
TUBB4AP04350 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TUBB4AP04350 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 AC092647.4-201ENST00000457211 535 ntBASIC17.31■□□□□ 0.36
TUBB4AP04350 AC091607.1-201ENST00000490318 1060 ntBASIC17.31■□□□□ 0.36
TUBB4AP04350 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.31■□□□□ 0.36
TUBB4AP04350 AC087388.1-201ENST00000571370 1112 ntBASIC17.31■□□□□ 0.36
TUBB4AP04350 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.31■□□□□ 0.36
TUBB4AP04350 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 AL365330.1-201ENST00000607459 531 ntBASIC17.31■□□□□ 0.36
TUBB4AP04350 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.31■□□□□ 0.36
TUBB4AP04350 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TUBB4AP04350 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.31■□□□□ 0.36
TUBB4AP04350 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TUBB4AP04350 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TUBB4AP04350 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.31■□□□□ 0.36
TUBB4AP04350 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
TUBB4AP04350 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB4AP04350 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TUBB4AP04350 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
TUBB4AP04350 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB4AP04350 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB4AP04350 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB4AP04350 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TUBB4AP04350 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB4AP04350 BEND3P1-201ENST00000421591 1944 ntBASIC17.3■□□□□ 0.36
TUBB4AP04350 RCN1P2-201ENST00000398357 915 ntBASIC17.3■□□□□ 0.36
TUBB4AP04350 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.3■□□□□ 0.36
TUBB4AP04350 ABCD1P5-201ENST00000445663 754 ntBASIC17.3■□□□□ 0.36
TUBB4AP04350 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBB4AP04350 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.3■□□□□ 0.36
TUBB4AP04350 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBB4AP04350 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB4AP04350 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.3■□□□□ 0.36
TUBB4AP04350 AL139424.1-201ENST00000607572 797 ntBASIC17.3■□□□□ 0.36
TUBB4AP04350 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.3■□□□□ 0.36
TUBB4AP04350 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB4AP04350 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBB4AP04350 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms