Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
MT-ND1P03886 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MT-ND1P03886 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
MT-ND1P03886 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MT-ND1P03886 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.27■□□□□ 0.04
MT-ND1P03886 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MT-ND1P03886 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MT-ND1P03886 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.27■□□□□ 0.04
MT-ND1P03886 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MT-ND1P03886 AKR1C7P-201ENST00000305623 895 ntBASIC15.27■□□□□ 0.04
MT-ND1P03886 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.27■□□□□ 0.04
MT-ND1P03886 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.27■□□□□ 0.04
MT-ND1P03886 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.27■□□□□ 0.04
MT-ND1P03886 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MT-ND1P03886 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.27■□□□□ 0.04
MT-ND1P03886 AC087641.1-201ENST00000557561 1021 ntBASIC15.27■□□□□ 0.04
MT-ND1P03886 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MT-ND1P03886 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.27■□□□□ 0.04
MT-ND1P03886 AC025062.2-201ENST00000605477 670 ntBASIC15.27■□□□□ 0.04
MT-ND1P03886 AC020765.3-201ENST00000613051 740 ntBASIC15.27■□□□□ 0.04
MT-ND1P03886 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.27■□□□□ 0.04
MT-ND1P03886 PGM5P2-202ENST00000637225 1043 ntBASIC15.27■□□□□ 0.04
MT-ND1P03886 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-ND1P03886 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
MT-ND1P03886 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.27■□□□□ 0.03
MT-ND1P03886 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-ND1P03886 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.27■□□□□ 0.03
MT-ND1P03886 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MT-ND1P03886 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-ND1P03886 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
MT-ND1P03886 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-ND1P03886 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-ND1P03886 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.27■□□□□ 0.03
MT-ND1P03886 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MT-ND1P03886 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MT-ND1P03886 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MT-ND1P03886 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MT-ND1P03886 AC139749.1-202ENST00000617529 3139 ntBASIC15.26■□□□□ 0.03
MT-ND1P03886 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MT-ND1P03886 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 TMBIM7P-203ENST00000641617 1718 ntBASIC15.26■□□□□ 0.03
MT-ND1P03886 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
MT-ND1P03886 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
MT-ND1P03886 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MT-ND1P03886 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.26■□□□□ 0.03
MT-ND1P03886 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.26■□□□□ 0.03
MT-ND1P03886 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.26■□□□□ 0.03
MT-ND1P03886 LAGE3P1-201ENST00000425356 484 ntBASIC15.26■□□□□ 0.03
MT-ND1P03886 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.26■□□□□ 0.03
MT-ND1P03886 AC021087.4-201ENST00000563761 564 ntBASIC15.26■□□□□ 0.03
MT-ND1P03886 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
MT-ND1P03886 AC006557.2-201ENST00000592985 1240 ntBASIC15.26■□□□□ 0.03
MT-ND1P03886 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.26■□□□□ 0.03
MT-ND1P03886 AL805961.1-202ENST00000641562 540 ntBASIC15.26■□□□□ 0.03
MT-ND1P03886 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
MT-ND1P03886 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND1P03886 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND1P03886 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND1P03886 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND1P03886 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.26■□□□□ 0.03
MT-ND1P03886 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 AL353732.1-201ENST00000569618 1459 ntBASIC15.26■□□□□ 0.03
MT-ND1P03886 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MT-ND1P03886 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
MT-ND1P03886 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MT-ND1P03886 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.25■□□□□ 0.03
MT-ND1P03886 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MT-ND1P03886 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MT-ND1P03886 AC008677.1-201ENST00000519230 1561 ntBASIC15.25■□□□□ 0.03
MT-ND1P03886 AC006504.4-201ENST00000592118 1568 ntBASIC15.25■□□□□ 0.03
MT-ND1P03886 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms