Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
COL1A1P02452 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL1A1P02452 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.13■□□□□ 0.65
COL1A1P02452 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL1A1P02452 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COL1A1P02452 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.12■□□□□ 0.65
COL1A1P02452 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
COL1A1P02452 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.12■□□□□ 0.65
COL1A1P02452 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COL1A1P02452 AC124067.4-201ENST00000519691 2379 ntBASIC19.12■□□□□ 0.65
COL1A1P02452 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
COL1A1P02452 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 AC011477.6-201ENST00000604980 1927 ntBASIC19.12■□□□□ 0.65
COL1A1P02452 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
COL1A1P02452 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.12■□□□□ 0.65
COL1A1P02452 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.12■□□□□ 0.65
COL1A1P02452 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.12■□□□□ 0.65
COL1A1P02452 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
COL1A1P02452 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.12■□□□□ 0.65
COL1A1P02452 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.12■□□□□ 0.65
COL1A1P02452 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.12■□□□□ 0.65
COL1A1P02452 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.12■□□□□ 0.65
COL1A1P02452 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.12■□□□□ 0.65
COL1A1P02452 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.12■□□□□ 0.65
COL1A1P02452 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.12■□□□□ 0.65
COL1A1P02452 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.12■□□□□ 0.65
COL1A1P02452 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.12■□□□□ 0.65
COL1A1P02452 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.12■□□□□ 0.65
COL1A1P02452 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
COL1A1P02452 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.12■□□□□ 0.65
COL1A1P02452 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL1A1P02452 AC018695.7-201ENST00000624587 2492 ntBASIC19.12■□□□□ 0.65
COL1A1P02452 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.12■□□□□ 0.65
COL1A1P02452 AC006449.5-201ENST00000610658 2098 ntBASIC19.12■□□□□ 0.65
COL1A1P02452 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.12■□□□□ 0.65
COL1A1P02452 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.11■□□□□ 0.65
COL1A1P02452 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COL1A1P02452 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.11■□□□□ 0.65
COL1A1P02452 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.11■□□□□ 0.65
COL1A1P02452 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.11■□□□□ 0.65
COL1A1P02452 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.11■□□□□ 0.65
COL1A1P02452 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COL1A1P02452 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.11■□□□□ 0.65
COL1A1P02452 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.11■□□□□ 0.65
COL1A1P02452 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.11■□□□□ 0.65
COL1A1P02452 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.11■□□□□ 0.65
COL1A1P02452 BTNL10-201ENST00000595971 695 ntBASIC19.11■□□□□ 0.65
COL1A1P02452 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.11■□□□□ 0.65
COL1A1P02452 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.11■□□□□ 0.65
COL1A1P02452 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
COL1A1P02452 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.11■□□□□ 0.65
COL1A1P02452 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COL1A1P02452 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.11■□□□□ 0.65
COL1A1P02452 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COL1A1P02452 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.11■□□□□ 0.65
COL1A1P02452 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
COL1A1P02452 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL1A1P02452 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
COL1A1P02452 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL1A1P02452 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.1■□□□□ 0.65
COL1A1P02452 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
COL1A1P02452 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.1■□□□□ 0.65
COL1A1P02452 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.1■□□□□ 0.65
COL1A1P02452 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL1A1P02452 VDAC1P7-201ENST00000462417 847 ntBASIC19.1■□□□□ 0.65
COL1A1P02452 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.1■□□□□ 0.65
COL1A1P02452 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.1■□□□□ 0.65
COL1A1P02452 FAM8A2P-201ENST00000528813 1142 ntBASIC19.1■□□□□ 0.65
COL1A1P02452 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms